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3iu0

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3iu0, resolution 1.90Å ()
Activity: Protein-glutamine gamma-glutamyltransferase, with EC number 2.3.2.13
Related: 1iu4


Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


Structural basis for zymogen activation and substrate binding of transglutaminase from Streptomyces mobaraense

Publication Abstract from PubMed

The crystal structure of the microbial transglutaminase (MTGase) zymogen from Streptomyces mobaraense has been determined at 1.9-A resolution using the molecular replacement method based on the crystal structure of the mature MTGase. The overall structure of this zymogen is similar to that of the mature form, consisting of a single disk-like domain with a deep active cleft at the edge of the molecule. A major portion of the prosequence (45 additional amino acid residues at the N terminus of the mature transglutaminase) folds into an L-shaped structure, consisting of an extended N-terminal segment linked with a one-turn short helix and a long alpha-helix. Two key residues in the short helix of the prosequence, Tyr-12 and Tyr-16, are located on top of the catalytic triad (Cys-110, Asp-301, and His-320) to block access of the substrate acyl donors and acceptors. Biochemical characterization of the mature MTGase, using N-alpha-benzyloxycarbonyl-L-glutaminylglycine as a substrate, revealed apparent K(m) and k(cat)/K(m) values of 52.66 mM and 40.42 mM(-1) min(-1), respectively. Inhibition studies using the partial prosequence SYAETYR and homologous sequence SQAETYR showed a noncompetitive inhibition mechanism with IC(50) values of 0.75 and 0.65 mM, respectively, but no cross-linking product formation. Nevertheless, the prosequence homologous oligopeptide SQAETQR, with Tyr-12 and Tyr-16 each replaced with Gln, exhibited inhibitory activity with the formation of the SQAETQR-monodansylcadaverine fluorophore cross-linking product (SQAETQR-C-DNS). MALDI-TOF tandem MS analysis of SQAETQR-C-DNS revealed molecular masses corresponding to those of (N)SQAETQ(C)-C-DNS and C-DNS-(N)QR(C) sequences, suggesting the incorporation of C-DNS onto the C-terminal Gln residue of the prosequence homologous oligopeptide. These results support the putative functional roles of both Tyr residues in substrate binding and inhibition.

Crystal structure and inhibition studies of transglutaminase from Streptomyces mobaraense., Yang MT, Chang CH, Wang JM, Wu TK, Wang YK, Chang CY, Li TT, J Biol Chem. 2011 Mar 4;286(9):7301-7. Epub 2010 Dec 29. PMID:021193394

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

Function

[TGAS_STRMB] Catalyzes the cross-linking of proteins and the conjugation of polyamines to proteins.

About this Structure

3iu0 is a 1 chain structure with sequence from Streptomyces mobaraensis. Full crystallographic information is available from OCA.

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