exit;
# Jmol state version 11.8.24  2010-04-26 08:00;
  # fullName = "jmolAppletSAT__608467373531312__";
  # documentBase = "http://www.proteopedia.org/wiki/index.php?title=Amantadine&action=edit";
  # codeBase = "http://www.proteopedia.org/wiki/extensions/Jmol/";


function _setWindowState() {
# height 300;
# width 300;
  stateVersion = 1108024;
  background [x000000];
  axis1Color = "[xff0000]";
  axis2Color = "[x008000]";
  axis3Color = "[x0000ff]";
  ambientPercent = 45;
  diffusePercent = 84;
  specular = true;
  specularPercent = 22;
  specularPower = 40;
  specularExponent = 6;
  statusReporting  = true;
}

function _setFileState() {

  set allowEmbeddedScripts false;
  set autoBond true;
  set appendNew true;
  set appletProxy "";
  set applySymmetryToBonds false;
  set bondRadiusMilliAngstroms 150;
  set bondTolerance 0.45;
  set defaultLattice {0.0 0.0 0.0};
  set defaultLoadScript "";
  set defaultVDW Jmol;
  set forceAutoBond false;
  set loadFormat "http://www.rcsb.org/pdb/files/%FILE.pdb";
  set minBondDistance 0.4;
  set pdbSequential false;
  set pdbGetHeader false;
  set percentVdwAtom 20;
  set smartAromatic true;
  reloadfile = false;
  if (loadedfileprev != "550f61a012bca41802f7e3969b23fd54");
    load /*file*/"/cgi-bin/getfrozenstructure?550f61a012bca41802f7e3969b23fd54";
    loadedfileprev = "550f61a012bca41802f7e3969b23fd54";
    reloadfile = true;
  endif;

}

function _setVariableState() {

   set defaultanglelabel "%VALUE %UNITS";
   set defaultcolorscheme "Jmol";
   set defaultdistancelabel "%VALUE %UNITS";
   set defaultdrawarrowscale 0.5;
   set defaultlattice "{0 0 0}";
   set defaultloadscript "";
   set defaulttorsionlabel "%VALUE %UNITS";
   set defaulttranslucent 0.5;
   set defaultvdw "Jmol";
  set allowembeddedscripts true;
  set allowkeystrokes false;
  set allowrotateselected false;
  set appletproxy "";
  set applysymmetrytobonds false;
  set atompicking true;
  set atomtypes "";
  set autobond true;
  set autofps false;
  set autoloadorientation false;
  set axes window;
  set axesmode 0;
  set axesscale 2.0;
  set bondmodeor false;
  set bondpicking false;
  set bondradiusmilliangstroms 150;
  set bondtolerance 0.45;
  set cartoonrockets false;
  set chaincasesensitive false;
  set dataseparator "~~~";
  set delaymaximumms 0;
  set dipolescale 1.0;
  set disablepopupmenu false;
  set displaycellparameters true;
  set dotdensity 3;
  set dotsselectedonly false;
  set dotsurface true;
  set dragselected false;
  set drawhover false;
  set drawpicking false;
  set dynamicmeasurements false;
  set ellipsoidarcs false;
  set ellipsoidaxes false;
  set ellipsoidaxisdiameter 0.02;
  set ellipsoidball true;
  set ellipsoiddotcount 200;
  set ellipsoiddots false;
  set ellipsoidfill false;
  set fontcaching true;
  set forceautobond false;
  set greyscalerendering false;
  set hbondsangleminimum 90.0;
  set hbondsbackbone false;
  set hbondsdistancemaximum 3.25;
  set hbondssolid false;
  set helixstep 1;
  set helppath "http://chemapps.stolaf.edu/jmol/docs/index.htm";
  set hermitelevel 0;
  set hidenameinpopup false;
  set hidenavigationpoint false;
  set highresolution false;
  set historylevel 0;
  set hoverdelay 0.5;
  set imagestate true;
  set isosurfacepropertysmoothing true;
  set justifymeasurements false;
  set loadatomdatatolerance 0.01;
  set loadformat "http://www.rcsb.org/pdb/files/%FILE.pdb";
  set measureallmodels false;
  set measurementlabels true;
  set messagestylechime false;
  set minbonddistance 0.4;
  set navigatesurface false;
  set navigationperiodic false;
  set navigationspeed 5.0;
  set pdbgetheader false;
  set pdbsequential false;
  set percentvdwatom 20;
  set pickingspinrate 10;
  set picklabel "";
  set pointgroupdistancetolerance 0.2;
  set pointgrouplineartolerance 8.0;
  set propertyatomnumbercolumncount 0;
  set propertyatomnumberfield 0;
  set propertycolorscheme "roygb";
  set propertydatacolumncount 0;
  set propertydatafield 0;
  set quaternionframe "p";
  set rangeselected false;
  set ribbonaspectratio 16;
  set ribbonborder false;
  set rocketbarrels false;
  set selectallmodels true;
  set selecthetero true;
  set selecthydrogen true;
  set sheetsmoothing 1.0;
  set showhiddenselectionhalos false;
  set showhydrogens true;
  set showkeystrokes true;
  set showmeasurements true;
  set showmultiplebonds true;
  set shownavigationpointalways false;
  set smartaromatic true;
  set solventprobe false;
  set solventproberadius 1.2;
  set ssbondsbackbone true;
  set stereodegrees -5;
  set strandcountformeshribbon 7;
  set strandcountforstrands 5;
  set testflag1 false;
  set testflag2 false;
  set testflag3 false;
  set testflag4 false;
  set tracealpha true;
  set useminimizationthread true;
  set usenumberlocalization true;
  set vectorscale 1.0;
  set vibrationperiod 1.0;
  set vibrationscale 1.0;
  set wireframerotation false;
  set zoomlarge true;

#user-defined variables; 
  @~anomalous_atoms ({});
  @~backbone_invisible ({});
  @~hydroxy_unchained_nucs ({});
  @~nobackbone_aas ({});
  @~nophosphorus_nucs ({});
  @~protein ({0:1611 1641:3252 3282:4893 4923:6534 6564:8175 8205:9816 9846:11457 11487:13098 13128:14739 14769:16380 16410:18021 18051:19662 19692:21303 21333:22944 22974:24585 24615:26226 26256:27867});
  @~unbondable_aas ({});
  @~unchained_aas ({});
  @~unchained_nucs ({});
  
  nummodels = 1;
  

# label defaults;
  select none;
  color label none;
  background label none;
  set labelOffset 4 4;
  set labelAlignment left;
  set labelPointer off;
  font label 13.0 SansSerif Plain;

}

function _setModelState() {
  calculate hbonds;
  select all;
  wireframe off;
  spacefill off;
  dots off;
  backbone off;
  trace off;
  ribbon off;
  cartoon off;
  strands off;
  rocket off;
  meshribbon off;
  isosurface off;
  halos off;
  color cpk;
  hbonds off;

  select ({1612 3253 4894 6535 8176 9817 11458 13099 14740 16381 18022 19663 21304 22945 24586 26227 27868});
  Spacefill 0.4625;
  select ({1613:1622 3254:3263 4895:4904 6536:6545 8177:8186 9818:9827 11459:11468 13100:13109 14741:14750 16382:16391 18023:18032 19664:19673 21305:21314 22946:22955 24587:24596 26228:26237 27869:27878});
  Spacefill 0.4875;
  select ({0:1611 1641:3252 3282:4893 4923:6534 6564:8175 8205:9816 9846:11457 11487:13098 13128:14739 14769:16380 16410:18021 18051:19662 19692:21303 21333:22944 22974:24585 24615:26226 26256:27867});
  color atoms opaque chain;
  select ({0:1611 1623:3252 3264:4893 4905:6534 6546:8175 8187:9816 9828:11457 11469:13098 13110:14739 14751:16380 16392:18021 18033:19662 19674:21303 21315:22944 22956:24585 24597:26226 26238:27867 27879:27896});
  Spacefill 0.0;
  select BONDS ({0 3:15 18:30 33:45 48:60 63:75 78:90 93:105 108:120 123:135 138:150 153:165 168:180 183:195 198:210 213:225 228:240 243:254});
  wireframe 0.36;
  select BONDS ({1 2 16 17 31 32 46 47 61 62 76 77 91 92 106 107 121 122 136 137 151 152 166 167 181 182 196 197 211 212 226 227 241 242 255:28134});
  wireframe 0.0;

  measures delete;
  select *; set measures angstroms;
  font measures 15.0 SansSerif Plain;
  select measures ({null});

  set echo off;
  set echo bottom center; echo "Amantadine";
  font echo 24.0 SansSerif Plain; color echo [xffffff];

  boundBox off;

  unitcell off;

  hover "%n %r, Chain=%c, Element=%e";

  frank on;
  font frank 16.0 SansSerif Bold;
  set fontScaling false;

}

function _setColorState() {
color "scheme_surface3=[x00ff00] [xff4c4c] [xe5e5e5] [xff0000]";
color "scheme_surface2=[xff4c4c] [xff7f00] [x3333ff] [x33ff33]";
color "scheme_surface1=[xff4c4c] [xff7f00] [x3333ff] [x33ff33]";
}

function _setFrameState() {
# frame state;
# modelCount 17;
# first 1.1;
# last 1.17;
  frame RANGE 1.1 1.17;
  animation DIRECTION +1;
  animation FPS 10;
  animation MODE PALINDROME 1.0 1.0;
  frame 1.1;
  animation OFF;
}

function _setPerspectiveState() {
  if (reloadfile);
    set perspectiveModel 11;
  endif;
  set scaleAngstromsPerInch 0.0;
  set perspectiveDepth true;
  set visualRange 5.0;
  set cameraDepth 3.0;
  boundbox corners {-14.231 -14.231 -18.288002} {14.231 14.231 18.987999} # volume = 30196.746;
  if (reloadfile);
    center {-0.0090908995 -0.0016363732 5.229092};
  endif;
  moveto 0.0 { 1000 6 -26 95.92} 573.58 0.0 0.0 {-0.0090908995 -0.0016363732 5.229092} 27.955376 {0.0 0.0 0.0} 1.3415781 -53.8364 0.0;;
  slab 100;depth 0;
  set spinX = 0; set spinY = 5; set spinZ = 0;spinFps = 30;
  spin axisangle {0.0 1.0 0.0} 10.0;
}

function _setSelectionState() {
  select ({1612:1622 3253:3263 4894:4904 6535:6545 8176:8186 9817:9827 11458:11468 13099:13109 14740:14750 16381:16391 18022:18032 19663:19673 21304:21314 22945:22955 24586:24596 26227:26237 27868:27878});
  set hideNotSelected false;
}

function _setState() {
  select all;
  labels off;
  measurements off;
  set refreshing false;
  _setWindowState;
  _setFileState;
  _setVariableState;
  _setModelState;

  _setColorState
  _setFrameState;
  _setPerspectiveState;
  _setSelectionState;
  set refreshing true;
  
  #update color key
  ppdiaSuffix = getProperty("appletInfo","htmlName");
  ppdiaSuffix = ppdiaSuffix[1][ppdiaSuffix.find('__')-1].replace('jmolApplet','');
  ppdiaColorKey = "";
  ppdiaJvsptCmd = "changeColorKeyDiv('" + ppdiaColorKey + "','" + ppdiaSuffix + "');";
  javascript @ppdiaJvsptCmd;

  if (antialiasDisplayFlag);
    antialiasDisplay = true;
  else;
    antialiasDisplay = false;
  endif;
  set antialiasTranslucent true;
  set antialiasImages true;
  spin on;
}

_setState;