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Ribosomal protein L29

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Crystal Structure of Ribosomal protein L29 (1r73)
Crystal Structure of Ribosomal protein L29 (1r73)
Ribosomal protein L29 NMR structure (1r73)
Domains: PRK00306
Resources: FirstGlance, OCA, PDBsum, RCSB, TOPSAN
Coordinates: save as pdb, mmCIF, xml



Ribosomal protein L29 (RPL29) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. RPL29 binds heparin and as such has a secondary function besides protein biosynthesis.




3D Structures of Ribosomal protein L29

RPL29

1r73 – RPL29 – Thermotoga maritime - NMR

L29 in 50S subunit+RNA

2xg0, 2xg2, 3kir, 3kit, 3kiw, 3kiy – TtRPL29 in 50S subunit+RNA fragments - Thermus thermophilus
2x9s, 2x9u, 3kni, 3knk, 3knm, 3kno, 2wrj, 2wrl, 2wro, 2wrr, 3hux, 3huz, 2wh2, 2wh4, 2wdi, 2wdj, 2wdl, 2wdn, 1vsp, 2v47 , 2v49, 1vsa, 2hgj, 2hgq, 2hgu, 2j01, 2j03, 1yl3, 3mrz, 3ms1, 3i8f, 3i8i, 3i9c, 3i9e, 3f1f, 3f1h, 3d5b, 3d5d, 2b66, 2b9n, 2b9p, 1giy, 2y0v, 2y0x, 2y0z, 2y11, 2y13, 2y15, 2y17, 2y19, 3pyo, 3pyr, 3pyt, 3pyv, 2xtg, 2xux, 2xqe - TtRPL29 in 50S subunit+5S RRNA+23S RRNA
3fin - TtRPL29 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM
2wwq – EcRPL29 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – Escherichia coli
3i1n, 3i1p, 3i1r, 3i1t, 3i20, 3i22, 3e1b, 3e1d, 3df2, 3df4, 2vhn, 2qov, 2qox, 2i2t, 2i2v, 1vs6, 1vs8, 2aw4, 2awb, 3oas, 3oat, 3ofd, 3og0, 3ofq, 1vt2, 1vor, 1vou, 1vow, 1voy, 1vp0, 1pnu, 1pny - EcRPL29 in 50S subunit+5S RRNA+23S RRNA
3fik, 2gya, 2gyc, 3bbx, 1p85, 1p86 - EcRPL29 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM
3kcr - EcRPL29 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase
3bbo - RPL29 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach
2zjq, 2zjr, 1nkw - DrRPL29 in 50S subunit+5S RRNA+23S RRNA – Deinococcus radiodurans
1jj2, 1ffk - HmRPL29P in 50S subunit+5S RRNA+23S RRNA]] - Haloarcula marismortui

L29 in 50S subunit + antibiotics

3dll, 2zjp, 3cf5, 1xbp, 1sm1, 1nwx, 1nwy, 3pio, 3pip - DrRPL29 in 50S subunit+5S RRNA+23S RRNA+general stress protein Ctc+antibiotic
2qam, 2qao, 2qba, 2qbc, 2qoz, 2qp1, 3ofc, 3ofz, 3ofr, 3orb - EcRPL29 in 50S subunit+5S RRNA+23S RRNA+antibiotic
3oh5, 3oh7, 3ohj, 3ohk, 3ohz, 3oi1, 3oi3, 3oi5 - TtRPL29 in 50S subunit+5S RRNA+23S RRNA+antibiotic
1k73, 1kc8, 1k8a, 1k9m, 1kd1, 1m1k, 3cxc - HmRPL29P in 50S subunit+5S RRNA+23S RRNA+antibiotic
1m90 - HmRPL29P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin


L29 in 50S subunit + ribosome releasing factor (RRF)

2qbe, 2qbg, 2qbi, 2qbk, 2z4l, 2z4n - EcRPL29 in 50S subunit+5S RRNA+23S RRNA+RRF
2rdo - EcRPL29 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM

L29 in 50S subunit + various proteins

2vhm - EcRPL29 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix
2j28 - EcRPL29 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM
2vrh – EcRPL29 + RPL23 + RPL24 + trigger factor
2d3o - EcRPL29 + RPL23 + RPL24 + 23S RRNA + trigger factor
2aar - DrRPL29 + RPL23 + 23S RRNA + trigger factor
1w2b - HmRPL29P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal

L29 in the 60S subunit

3o5h, 3o58 - yRPL29 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast
1s1i - yRPL29 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM
3izr – wRPL29 in the 60S subunit – wheat

L29 in large + small ribosomal subunit

1ml5 - EcRPL29 in 50S ribosomal subunit+30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA – EM

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